STARS Implementation Guide
0.1.0 - ci-build
STARS Implementation Guide - Local Development build (v0.1.0). See the Directory of published versions
{
"resourceType" : "Bundle",
"id" : "aa4dd75c-673b-4263-8c70-6e92fef4a48b",
"type" : "message",
"entry" : [
{
"fullUrl" : "urn:uuid:43f763f5-e640-4038-82c9-3ebaa8ee594c",
"resource" : {
"resourceType" : "MessageHeader",
"id" : "messageheader-example-cat3-cow-diagnosticreport",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-messageheader"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: MessageHeader</b><a name=\"messageheader-example-cat3-cow-diagnosticreport\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource MessageHeader "messageheader-example-cat3-cow-diagnosticreport" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-messageheader.html\">CSIRO STARS MessageHeader Profile</a></p></div><p><b>event</b>: DiagnosticReport (Details: https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/message-type-code-system code DiagnosticReport = 'DiagnosticReport', stated as 'null')</p><h3>Destinations</h3><table class=\"grid\"><tr><td>-</td><td><b>Endpoint</b></td><td><b>Receiver</b></td></tr><tr><td>*</td><td><a href=\"https://acdp.csiro.au/starsapi-sandbox/fhir\">https://acdp.csiro.au/starsapi-sandbox/fhir</a></td><td><a href=\"Organization-ACDP-TEST99.html\">Organization/ACDP-TEST99</a> "CSIRO ACDP-TEST99"</td></tr></table><p><b>sender</b>: <a href=\"Organization-ACDP-TEST01.html\">Organization/ACDP-TEST01</a> "CSIRO ACDP-TEST01"</p><h3>Sources</h3><table class=\"grid\"><tr><td>-</td><td><b>Endpoint</b></td></tr><tr><td>*</td><td><a href=\"https://acdp.csiro.au/starsapi-sandbox/fhir\">https://acdp.csiro.au/starsapi-sandbox/fhir</a></td></tr></table><p><b>focus</b>: <a href=\"#DiagnosticReport_example-diagnosticreport-cow\">See above (urn:uuid:b669bffc-2e2a-402c-93d1-f10e6136f496)</a></p></div>"
},
"eventCoding" : {
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/message-type-code-system",
"code" : "DiagnosticReport"
},
"destination" : [
{
"endpoint" : "https://acdp.csiro.au/starsapi-sandbox/fhir",
"receiver" : {
"reference" : "Organization/ACDP-TEST99"
}
}
],
"sender" : {
"reference" : "Organization/ACDP-TEST01"
},
"source" : {
"endpoint" : "https://acdp.csiro.au/starsapi-sandbox/fhir"
},
"focus" : [
{
"reference" : "urn:uuid:b669bffc-2e2a-402c-93d1-f10e6136f496"
}
]
}
},
{
"fullUrl" : "urn:uuid:b669bffc-2e2a-402c-93d1-f10e6136f496",
"resource" : {
"resourceType" : "DiagnosticReport",
"id" : "example-diagnosticreport-cow",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-diagnosticreport"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: DiagnosticReport</b><a name=\"example-diagnosticreport-cow\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource DiagnosticReport "example-diagnosticreport-cow" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-diagnosticreport.html\">CSIRO STARS DiagnosticReport Profile</a></p></div><p><b>identifier</b>: id:\u00a022-00002</p><p><b>basedOn</b>: <a href=\"ServiceRequest/47fe6344-e640-4038-82c9-3ebaa8ee594c\">ServiceRequest/47fe6344-e640-4038-82c9-3ebaa8ee594c</a></p><p><b>status</b>: final</p><p><b>code</b>: democode <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#democode)</span></p><p><b>issued</b>: 29 Nov 2022, 11:00:00 am</p><p><b>resultsInterpreter</b>: <a href=\"Practitioner-practitioner-example.html\">Practitioner/practitioner-example</a> ""</p><p><b>specimen</b>: </p><ul><li><a href=\"Specimen-specimen-example-serum-sample-1.html\">Specimen/specimen-example-serum-sample-1</a></li><li><a href=\"Specimen-specimen-example-EDTA-blood-sample-2.html\">Specimen/specimen-example-EDTA-blood-sample-2</a></li><li><a href=\"Specimen-specimen-example-swab-sample-3.html\">Specimen/specimen-example-swab-sample-3</a></li><li><a href=\"Specimen-specimen-example-swab-sample-4.html\">Specimen/specimen-example-swab-sample-4</a></li></ul><p><b>result</b>: </p><ul><li><a href=\"#Observation_observation-example-category3-sample-3-FMDVISO\">See above (urn:uuid:fcbef5c9-e7b9-4133-92aa-1e5f2c798c48)</a></li><li><a href=\"#Observation_observation-example-category3-sample-4-FMDVISO\">See above (urn:uuid:20aceb62-6e6f-4a94-a432-b18b630921d9)</a></li><li><a href=\"#Observation_observation-example-category3-sample-3-VSVISO\">See above (urn:uuid:a39356e2-9e8b-4966-b2a3-a519db3112ad)</a></li><li><a href=\"#Observation_observation-example-category3-sample-4-VSVISO\">See above (urn:uuid:647c4bb8-6baa-46ad-ac87-ee956d331b9d)</a></li><li><a href=\"#Observation_observation-example-category3-sample-1-FMDVMPTQM\">See above (urn:uuid:95481e7c-2bdf-4ac9-bd59-ff22ed962b74)</a></li><li><a href=\"#Observation_observation-example-category3-sample-2-FMDVMPTQM\">See above (urn:uuid:5606726e-583f-4da4-a480-34bd43fcd82d)</a></li><li><a href=\"#Observation_observation-example-category3-sample-3-FMDVMPTQM\">See above (urn:uuid:efc6dff0-6d0d-4781-ba75-36f60fb88475)</a></li><li><a href=\"#Observation_observation-example-category3-sample-4-FMDVMPTQM\">See above (urn:uuid:d21aec15-b559-41cd-9422-6bab3f80fda2)</a></li><li><a href=\"#Observation_observation-example-category3-sample-1-VSVTQMMP\">See above (urn:uuid:798660b3-84e3-4a9c-8970-800117eadb64)</a></li><li><a href=\"#Observation_observation-example-category3-sample-2-VSVTQMMP\">See above (urn:uuid:c8251127-30f3-4363-929f-6763ce4f9528)</a></li><li><a href=\"#Observation_observation-example-category3-sample-3-VSVTQMMP\">See above (urn:uuid:388b33dd-fa80-487e-a5bd-d55740198f23)</a></li><li><a href=\"#Observation_observation-example-category3-sample-4-VSVTQMMP\">See above (urn:uuid:76f99928-e324-4c8f-86db-1fdbb2803d23)</a></li><li><a href=\"#Observation_observation-example-category3-sample-1-FMDCEA\">See above (urn:uuid:87505ee8-9b42-4106-ac09-d67082b7b7fc)</a></li><li><a href=\"#Observation_observation-example-category3-sample-1-FMDCEAS1\">See above (urn:uuid:4b2612f6-4ce0-4d20-b27c-a57ccfe3ca78)</a></li><li><a href=\"#Observation_observation-example-category3-sample-1-FMDCE0\">See above (urn:uuid:bff818b2-3a93-497a-b141-f79bc00ee3ea)</a></li><li><a href=\"#Observation_observation-example-category3-sample-1-VSVSNTIN\">See above (urn:uuid:455664c3-066a-46f0-8bba-6912876dd4e1)</a></li><li><a href=\"#Observation_observation-example-category3-sample-1-VSVSNTNJ\">See above (urn:uuid:b52a62ea-051f-434f-8bfb-4ccf14bfe348)</a></li></ul><p><b>conclusion</b>: Please note that insufficient sample volume was received to complete the FMD Antigen capture ELISA. In cases where vesicular epithelium is not available for submission, a minimum sample volume of 3 mL is required for all vesicular disease exclusion testing.</p></div>"
},
"identifier" : [
{
"value" : "22-00002"
}
],
"basedOn" : [
{
"reference" : "ServiceRequest/47fe6344-e640-4038-82c9-3ebaa8ee594c"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"code" : "democode"
}
]
},
"issued" : "2022-11-29T00:00:00Z",
"resultsInterpreter" : [
{
"reference" : "Practitioner/practitioner-example"
}
],
"specimen" : [
{
"reference" : "Specimen/specimen-example-serum-sample-1"
},
{
"reference" : "Specimen/specimen-example-EDTA-blood-sample-2"
},
{
"reference" : "Specimen/specimen-example-swab-sample-3"
},
{
"reference" : "Specimen/specimen-example-swab-sample-4"
}
],
"result" : [
{
"reference" : "urn:uuid:fcbef5c9-e7b9-4133-92aa-1e5f2c798c48"
},
{
"reference" : "urn:uuid:20aceb62-6e6f-4a94-a432-b18b630921d9"
},
{
"reference" : "urn:uuid:a39356e2-9e8b-4966-b2a3-a519db3112ad"
},
{
"reference" : "urn:uuid:647c4bb8-6baa-46ad-ac87-ee956d331b9d"
},
{
"reference" : "urn:uuid:95481e7c-2bdf-4ac9-bd59-ff22ed962b74"
},
{
"reference" : "urn:uuid:5606726e-583f-4da4-a480-34bd43fcd82d"
},
{
"reference" : "urn:uuid:efc6dff0-6d0d-4781-ba75-36f60fb88475"
},
{
"reference" : "urn:uuid:d21aec15-b559-41cd-9422-6bab3f80fda2"
},
{
"reference" : "urn:uuid:798660b3-84e3-4a9c-8970-800117eadb64"
},
{
"reference" : "urn:uuid:c8251127-30f3-4363-929f-6763ce4f9528"
},
{
"reference" : "urn:uuid:388b33dd-fa80-487e-a5bd-d55740198f23"
},
{
"reference" : "urn:uuid:76f99928-e324-4c8f-86db-1fdbb2803d23"
},
{
"reference" : "urn:uuid:87505ee8-9b42-4106-ac09-d67082b7b7fc"
},
{
"reference" : "urn:uuid:4b2612f6-4ce0-4d20-b27c-a57ccfe3ca78"
},
{
"reference" : "urn:uuid:bff818b2-3a93-497a-b141-f79bc00ee3ea"
},
{
"reference" : "urn:uuid:455664c3-066a-46f0-8bba-6912876dd4e1"
},
{
"reference" : "urn:uuid:b52a62ea-051f-434f-8bfb-4ccf14bfe348"
}
],
"conclusion" : "Please note that insufficient sample volume was received to complete the FMD Antigen capture ELISA. In cases where vesicular epithelium is not available for submission, a minimum sample volume of 3 mL is required for all vesicular disease exclusion testing."
}
},
{
"fullUrl" : "urn:uuid:fcbef5c9-e7b9-4133-92aa-1e5f2c798c48",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-3-FMDVISO",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-3-FMDVISO\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-3-FMDVISO" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test3-fmdviso</p><p><b>status</b>: final</p><p><b>code</b>: Foot and Mouth Disease Virus Isolation <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XV10082)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: Not detected</p><p><b>interpretation</b>: Not detected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#ND)</span></p><p><b>note</b>: The samples were inoculated onto BHK and LFBK cells and observed for CPE for 3 days for 2 passages. Pass 2 materials\r\nwere further investigated by FMD Taqman PCR for the presence of FMDV.</p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-swab-sample-3.html\">Specimen/specimen-example-swab-sample-3</a></p></div>"
},
"identifier" : [
{
"value" : "test3-fmdviso"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XV10082",
"display" : "Foot and Mouth Disease Virus Isolation"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueString" : "Not detected",
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "ND",
"display" : "Not detected"
}
]
}
],
"note" : [
{
"text" : "The samples were inoculated onto BHK and LFBK cells and observed for CPE for 3 days for 2 passages. Pass 2 materials\r\nwere further investigated by FMD Taqman PCR for the presence of FMDV."
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-swab-sample-3"
}
}
},
{
"fullUrl" : "urn:uuid:20aceb62-6e6f-4a94-a432-b18b630921d9",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-4-FMDVISO",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-4-FMDVISO\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-4-FMDVISO" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test4-fmdviso</p><p><b>status</b>: final</p><p><b>code</b>: Foot and Mouth Disease Virus Isolation <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XV10082)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: Not detected</p><p><b>interpretation</b>: Not detected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#ND)</span></p><p><b>note</b>: The samples were inoculated onto BHK and LFBK cells and observed for CPE for 3 days for 2 passages. Pass 2 materials\r\nwere further investigated by FMD Taqman PCR for the presence of FMDV.</p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-swab-sample-4.html\">Specimen/specimen-example-swab-sample-4</a></p></div>"
},
"identifier" : [
{
"value" : "test4-fmdviso"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XV10082",
"display" : "Foot and Mouth Disease Virus Isolation"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueString" : "Not detected",
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "ND",
"display" : "Not detected"
}
]
}
],
"note" : [
{
"text" : "The samples were inoculated onto BHK and LFBK cells and observed for CPE for 3 days for 2 passages. Pass 2 materials\r\nwere further investigated by FMD Taqman PCR for the presence of FMDV."
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-swab-sample-4"
}
}
},
{
"fullUrl" : "urn:uuid:a39356e2-9e8b-4966-b2a3-a519db3112ad",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-3-VSVISO",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-3-VSVISO\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-3-VSVISO" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test3-vsviso</p><p><b>status</b>: final</p><p><b>code</b>: Vesicular Stomatitis Virus Isolation <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XV10139)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: Not detected</p><p><b>interpretation</b>: Not detected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#ND)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-swab-sample-3.html\">Specimen/specimen-example-swab-sample-3</a></p></div>"
},
"identifier" : [
{
"value" : "test3-vsviso"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XV10139",
"display" : "Vesicular Stomatitis Virus Isolation"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueString" : "Not detected",
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "ND",
"display" : "Not detected"
}
]
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-swab-sample-3"
}
}
},
{
"fullUrl" : "urn:uuid:647c4bb8-6baa-46ad-ac87-ee956d331b9d",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-4-VSVISO",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-4-VSVISO\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-4-VSVISO" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test4-vsviso</p><p><b>status</b>: final</p><p><b>code</b>: Vesicular Stomatitis Virus Isolation <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XV10139)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: Not detected</p><p><b>interpretation</b>: Not detected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#ND)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-swab-sample-4.html\">Specimen/specimen-example-swab-sample-4</a></p></div>"
},
"identifier" : [
{
"value" : "test4-vsviso"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XV10139",
"display" : "Vesicular Stomatitis Virus Isolation"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueString" : "Not detected",
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "ND",
"display" : "Not detected"
}
]
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-swab-sample-4"
}
}
},
{
"fullUrl" : "urn:uuid:95481e7c-2bdf-4ac9-bd59-ff22ed962b74",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-1-FMDVMPTQM",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-1-FMDVMPTQM\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-1-FMDVMPTQM" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test1-fmdvmptqm</p><p><b>status</b>: final</p><p><b>code</b>: Foot and Mouth Disease - Multiplex Pirbright and Tetracore Assay RT - TaqMan Assay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XR10026)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: 45 Cycle Threshold<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code {Ct_value} = '{Ct_value}')</span></p><p><b>interpretation</b>: Negative <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#NEG)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-serum-sample-1.html\">Specimen/specimen-example-serum-sample-1</a></p></div>"
},
"identifier" : [
{
"value" : "test1-fmdvmptqm"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XR10026",
"display" : "Foot and Mouth Disease - Multiplex Pirbright and Tetracore Assay RT - TaqMan Assay"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueQuantity" : {
"value" : 45,
"unit" : "Cycle Threshold",
"system" : "http://unitsofmeasure.org",
"code" : "{Ct_value}"
},
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "NEG",
"display" : "Negative"
}
]
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-serum-sample-1"
}
}
},
{
"fullUrl" : "urn:uuid:5606726e-583f-4da4-a480-34bd43fcd82d",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-2-FMDVMPTQM",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-2-FMDVMPTQM\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-2-FMDVMPTQM" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test2-fmdvmptqm</p><p><b>status</b>: final</p><p><b>code</b>: Foot and Mouth Disease - Multiplex Pirbright and Tetracore Assay RT - TaqMan Assay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XR10026)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: 45 Cycle Threshold<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code {Ct_value} = '{Ct_value}')</span></p><p><b>interpretation</b>: Negative <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#NEG)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-EDTA-blood-sample-2.html\">Specimen/specimen-example-EDTA-blood-sample-2</a></p></div>"
},
"identifier" : [
{
"value" : "test2-fmdvmptqm"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XR10026",
"display" : "Foot and Mouth Disease - Multiplex Pirbright and Tetracore Assay RT - TaqMan Assay"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueQuantity" : {
"value" : 45,
"unit" : "Cycle Threshold",
"system" : "http://unitsofmeasure.org",
"code" : "{Ct_value}"
},
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "NEG",
"display" : "Negative"
}
]
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-EDTA-blood-sample-2"
}
}
},
{
"fullUrl" : "urn:uuid:efc6dff0-6d0d-4781-ba75-36f60fb88475",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-3-FMDVMPTQM",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-3-FMDVMPTQM\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-3-FMDVMPTQM" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test3-fmdvmptqm</p><p><b>status</b>: final</p><p><b>code</b>: Foot and Mouth Disease - Multiplex Pirbright and Tetracore Assay RT - TaqMan Assay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XR10026)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: 45 Cycle Threshold<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code {Ct_value} = '{Ct_value}')</span></p><p><b>interpretation</b>: Negative <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#NEG)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-swab-sample-3.html\">Specimen/specimen-example-swab-sample-3</a></p></div>"
},
"identifier" : [
{
"value" : "test3-fmdvmptqm"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XR10026",
"display" : "Foot and Mouth Disease - Multiplex Pirbright and Tetracore Assay RT - TaqMan Assay"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueQuantity" : {
"value" : 45,
"unit" : "Cycle Threshold",
"system" : "http://unitsofmeasure.org",
"code" : "{Ct_value}"
},
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "NEG",
"display" : "Negative"
}
]
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-swab-sample-3"
}
}
},
{
"fullUrl" : "urn:uuid:d21aec15-b559-41cd-9422-6bab3f80fda2",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-4-FMDVMPTQM",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-4-FMDVMPTQM\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-4-FMDVMPTQM" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test4-fmdvmptqm</p><p><b>status</b>: final</p><p><b>code</b>: Foot and Mouth Disease - Multiplex Pirbright and Tetracore Assay RT - TaqMan Assay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XR10026)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: 45 Cycle Threshold<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code {Ct_value} = '{Ct_value}')</span></p><p><b>interpretation</b>: Negative <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#NEG)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-swab-sample-4.html\">Specimen/specimen-example-swab-sample-4</a></p></div>"
},
"identifier" : [
{
"value" : "test4-fmdvmptqm"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XR10026",
"display" : "Foot and Mouth Disease - Multiplex Pirbright and Tetracore Assay RT - TaqMan Assay"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueQuantity" : {
"value" : 45,
"unit" : "Cycle Threshold",
"system" : "http://unitsofmeasure.org",
"code" : "{Ct_value}"
},
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "NEG",
"display" : "Negative"
}
]
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-swab-sample-4"
}
}
},
{
"fullUrl" : "urn:uuid:798660b3-84e3-4a9c-8970-800117eadb64",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-1-VSVTQMMP",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-1-VSVTQMMP\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-1-VSVTQMMP" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test1-vsvtqmmp</p><p><b>status</b>: final</p><p><b>code</b>: Vesicular Stomatitis Virus - Multiplex Indiana and New Jersey - TaqMan Assay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XR10078)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: 45 Cycle Threshold<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code {Ct_value} = '{Ct_value}')</span></p><p><b>interpretation</b>: Negative <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#NEG)</span></p><p><b>note</b>: NATA accreditation does not cover the performance of this service.</p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-serum-sample-1.html\">Specimen/specimen-example-serum-sample-1</a></p></div>"
},
"identifier" : [
{
"value" : "test1-vsvtqmmp"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XR10078",
"display" : "Vesicular Stomatitis Virus - Multiplex Indiana and New Jersey - TaqMan Assay"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueQuantity" : {
"value" : 45,
"unit" : "Cycle Threshold",
"system" : "http://unitsofmeasure.org",
"code" : "{Ct_value}"
},
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "NEG",
"display" : "Negative"
}
]
}
],
"note" : [
{
"text" : "NATA accreditation does not cover the performance of this service."
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-serum-sample-1"
}
}
},
{
"fullUrl" : "urn:uuid:c8251127-30f3-4363-929f-6763ce4f9528",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-2-VSVTQMMP",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-2-VSVTQMMP\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-2-VSVTQMMP" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test2-vsvtqmmp</p><p><b>status</b>: final</p><p><b>code</b>: Vesicular Stomatitis Virus - Multiplex Indiana and New Jersey - TaqMan Assay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XR10078)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: 45 Cycle Threshold<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code {Ct_value} = '{Ct_value}')</span></p><p><b>interpretation</b>: Negative <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#NEG)</span></p><p><b>note</b>: NATA accreditation does not cover the performance of this service.</p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-EDTA-blood-sample-2.html\">Specimen/specimen-example-EDTA-blood-sample-2</a></p></div>"
},
"identifier" : [
{
"value" : "test2-vsvtqmmp"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XR10078",
"display" : "Vesicular Stomatitis Virus - Multiplex Indiana and New Jersey - TaqMan Assay"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueQuantity" : {
"value" : 45,
"unit" : "Cycle Threshold",
"system" : "http://unitsofmeasure.org",
"code" : "{Ct_value}"
},
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "NEG",
"display" : "Negative"
}
]
}
],
"note" : [
{
"text" : "NATA accreditation does not cover the performance of this service."
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-EDTA-blood-sample-2"
}
}
},
{
"fullUrl" : "urn:uuid:388b33dd-fa80-487e-a5bd-d55740198f23",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-3-VSVTQMMP",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-3-VSVTQMMP\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-3-VSVTQMMP" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test3-vsvtqmmp</p><p><b>status</b>: final</p><p><b>code</b>: Vesicular Stomatitis Virus - Multiplex Indiana and New Jersey - TaqMan Assay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XR10078)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: 45 Cycle Threshold<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code {Ct_value} = '{Ct_value}')</span></p><p><b>interpretation</b>: Negative <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#NEG)</span></p><p><b>note</b>: NATA accreditation does not cover the performance of this service.</p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-swab-sample-3.html\">Specimen/specimen-example-swab-sample-3</a></p></div>"
},
"identifier" : [
{
"value" : "test3-vsvtqmmp"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XR10078",
"display" : "Vesicular Stomatitis Virus - Multiplex Indiana and New Jersey - TaqMan Assay"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueQuantity" : {
"value" : 45,
"unit" : "Cycle Threshold",
"system" : "http://unitsofmeasure.org",
"code" : "{Ct_value}"
},
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "NEG",
"display" : "Negative"
}
]
}
],
"note" : [
{
"text" : "NATA accreditation does not cover the performance of this service."
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-swab-sample-3"
}
}
},
{
"fullUrl" : "urn:uuid:76f99928-e324-4c8f-86db-1fdbb2803d23",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-4-VSVTQMMP",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-4-VSVTQMMP\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-4-VSVTQMMP" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test4-vsvtqmmp</p><p><b>status</b>: final</p><p><b>code</b>: Vesicular Stomatitis Virus - Multiplex Indiana and New Jersey - TaqMan Assay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XR10078)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: 45 Cycle Threshold<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code {Ct_value} = '{Ct_value}')</span></p><p><b>interpretation</b>: Negative <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#NEG)</span></p><p><b>note</b>: NATA accreditation does not cover the performance of this service.</p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-swab-sample-4.html\">Specimen/specimen-example-swab-sample-4</a></p></div>"
},
"identifier" : [
{
"value" : "test4-vsvtqmmp"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XR10078",
"display" : "Vesicular Stomatitis Virus - Multiplex Indiana and New Jersey - TaqMan Assay"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueQuantity" : {
"value" : 45,
"unit" : "Cycle Threshold",
"system" : "http://unitsofmeasure.org",
"code" : "{Ct_value}"
},
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "NEG",
"display" : "Negative"
}
]
}
],
"note" : [
{
"text" : "NATA accreditation does not cover the performance of this service."
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-swab-sample-4"
}
}
},
{
"fullUrl" : "urn:uuid:87505ee8-9b42-4106-ac09-d67082b7b7fc",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-1-FMDCEA",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-1-FMDCEA\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-1-FMDCEA" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test1-fmdcea</p><p><b>status</b>: final</p><p><b>code</b>: Foot and Mouth Disease Serotype A: C ELISA for the Detection of Antibodies <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XE10027)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: Not detected</p><p><b>interpretation</b>: Not detected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#ND)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-serum-sample-1.html\">Specimen/specimen-example-serum-sample-1</a></p></div>"
},
"identifier" : [
{
"value" : "test1-fmdcea"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XE10027",
"display" : "Foot and Mouth Disease Serotype A: C ELISA for the Detection of Antibodies"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueString" : "Not detected",
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "ND",
"display" : "Not detected"
}
]
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-serum-sample-1"
}
}
},
{
"fullUrl" : "urn:uuid:4b2612f6-4ce0-4d20-b27c-a57ccfe3ca78",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-1-FMDCEAS1",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-1-FMDCEAS1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-1-FMDCEAS1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test1-fmdceas1</p><p><b>status</b>: final</p><p><b>code</b>: Foot and Mouth Disease Serotype Asia 1: C ELISA for Detection of Antibodies <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XE10028)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: Not detected</p><p><b>interpretation</b>: Not detected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#ND)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-serum-sample-1.html\">Specimen/specimen-example-serum-sample-1</a></p></div>"
},
"identifier" : [
{
"value" : "test1-fmdceas1"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XE10028",
"display" : "Foot and Mouth Disease Serotype Asia 1: C ELISA for Detection of Antibodies"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueString" : "Not detected",
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "ND",
"display" : "Not detected"
}
]
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-serum-sample-1"
}
}
},
{
"fullUrl" : "urn:uuid:bff818b2-3a93-497a-b141-f79bc00ee3ea",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-1-FMDCE0",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-1-FMDCE0\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-1-FMDCE0" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test1-fmdce0</p><p><b>status</b>: final</p><p><b>code</b>: Foot and Mouth Disease Serotype O: C ELISA for the Detection of Antibodies <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XE10030)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: Not detected</p><p><b>interpretation</b>: Not detected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#ND)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-serum-sample-1.html\">Specimen/specimen-example-serum-sample-1</a></p></div>"
},
"identifier" : [
{
"value" : "test1-fmdce0"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XE10030",
"display" : "Foot and Mouth Disease Serotype O: C ELISA for the Detection of Antibodies"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueString" : "Not detected",
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "ND",
"display" : "Not detected"
}
]
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-serum-sample-1"
}
}
},
{
"fullUrl" : "urn:uuid:455664c3-066a-46f0-8bba-6912876dd4e1",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-1-VSVSNTIN",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-1-VSVSNTIN\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-1-VSVSNTIN" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test1-vsvsntin</p><p><b>status</b>: final</p><p><b>code</b>: Vesiculovirus Serum Neutralisation Test for Antibody for Serotype Indiana <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XN10045)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: Not detected</p><p><b>interpretation</b>: Not detected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#ND)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-serum-sample-1.html\">Specimen/specimen-example-serum-sample-1</a></p></div>"
},
"identifier" : [
{
"value" : "test1-vsvsntin"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XN10045",
"display" : "Vesiculovirus Serum Neutralisation Test for Antibody for Serotype Indiana"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueString" : "Not detected",
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "ND",
"display" : "Not detected"
}
]
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-serum-sample-1"
}
}
},
{
"fullUrl" : "urn:uuid:b52a62ea-051f-434f-8bfb-4ccf14bfe348",
"resource" : {
"resourceType" : "Observation",
"id" : "observation-example-category3-sample-1-VSVSNTNJ",
"meta" : {
"profile" : [
"https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"observation-example-category3-sample-1-VSVSNTNJ\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "observation-example-category3-sample-1-VSVSNTNJ" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-observation-result.html\">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id:\u00a0test1-vsvsntnj</p><p><b>status</b>: final</p><p><b>code</b>: Vesiculovirus Serum Neutralisation Test for Antibody for Serotype New Jersey <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-analysis-code-system.html\">STARS Legacy Analysis Code System</a>#XN10046)</span></p><p><b>effective</b>: 29 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: Not detected</p><p><b>interpretation</b>: Not detected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html\">ObservationInterpretation</a>#ND)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-serum-sample-1.html\">Specimen/specimen-example-serum-sample-1</a></p></div>"
},
"identifier" : [
{
"value" : "test1-vsvsntnj"
}
],
"status" : "final",
"code" : {
"coding" : [
{
"system" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system",
"code" : "XN10046",
"display" : "Vesiculovirus Serum Neutralisation Test for Antibody for Serotype New Jersey"
}
]
},
"effectiveInstant" : "2022-11-29T10:30:10+10:00",
"issued" : "2022-11-29T10:30:10+10:00",
"valueString" : "Not detected",
"interpretation" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code" : "ND",
"display" : "Not detected"
}
]
}
],
"specimen" : {
"reference" : "Specimen/specimen-example-serum-sample-1"
}
}
}
]
}
IG © 2020+ . Package csiro.stars#0.1.0 based on FHIR 4.3.0. Generated 2023-04-26
Links: Table of Contents |
QA Report