STARS Implementation Guide
0.1.0 - ci-build
STARS Implementation Guide - Local Development build (v0.1.0). See the Directory of published versions
@prefix fhir: <http://hl7.org/fhir/> . @prefix owl: <http://www.w3.org/2002/07/owl#> . @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . @prefix sct: <http://snomed.info/id/> . @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . # - resource ------------------------------------------------------------------- a fhir:Bundle ; fhir:nodeRole fhir:treeRoot ; fhir:id [ fhir:v "zz4dd75c-673b-4263-8c70-6e92fef4a48b"] ; # fhir:type [ fhir:v "message"] ; # fhir:entry ( [ fhir:fullUrl [ fhir:v "urn:uuid:99f763f5-e640-4038-82c9-3ebaa8ee594c"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:99f763f5-e640-4038-82c9-3ebaa8ee594c> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:47fe6344-e640-4038-82c9-3ebaa8ee594c"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:47fe6344-e640-4038-82c9-3ebaa8ee594c> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:44446344-e640-4038-82c9-3ebaa8ee594c"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:44446344-e640-4038-82c9-3ebaa8ee594c> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:77776344-e640-4038-82c9-3ebaa8ee594c"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:77776344-e640-4038-82c9-3ebaa8ee594c> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:88886344-e640-4038-82c9-3ebaa8ee594c"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:88886344-e640-4038-82c9-3ebaa8ee594c> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:99996344-e640-4038-82c9-3ebaa8ee594c"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:99996344-e640-4038-82c9-3ebaa8ee594c> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:310d26aa-a23b-4c51-8157-5ec8cb0d8f04"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:310d26aa-a23b-4c51-8157-5ec8cb0d8f04> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:16326fe4-54f3-4554-bbd8-12a828aee6a4"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:16326fe4-54f3-4554-bbd8-12a828aee6a4> ) ] ) . # <urn:uuid:99f763f5-e640-4038-82c9-3ebaa8ee594c> a fhir:MessageHeader ; fhir:id [ fhir:v "messageheader-example-cat3-cow-servicerequest"] ; # fhir:meta [ ( fhir:profile [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-messageheader"^^xsd:anyURI ; fhir:link <https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-messageheader> ] ) ] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: MessageHeader</b><a name=\"messageheader-example-cat3-cow-servicerequest\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource MessageHeader "messageheader-example-cat3-cow-servicerequest" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-messageheader.html\">CSIRO STARS MessageHeader Profile</a></p></div><p><b>event</b>: ServiceRequest (Details: https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/message-type-code-system code ServiceRequest = 'ServiceRequest', stated as 'null')</p><h3>Destinations</h3><table class=\"grid\"><tr><td>-</td><td><b>Endpoint</b></td><td><b>Receiver</b></td></tr><tr><td>*</td><td><a href=\"https://acdp.csiro.au/starsapi-sandbox/fhir\">https://acdp.csiro.au/starsapi-sandbox/fhir</a></td><td><a href=\"Organization-ACDP-TEST99.html\">Organization/ACDP-TEST99</a> "CSIRO ACDP-TEST99"</td></tr></table><p><b>sender</b>: <a href=\"Organization-ACDP-TEST01.html\">Organization/ACDP-TEST01</a> "CSIRO ACDP-TEST01"</p><h3>Sources</h3><table class=\"grid\"><tr><td>-</td><td><b>Endpoint</b></td></tr><tr><td>*</td><td><a href=\"https://acdp.csiro.au/starsapi-sandbox/fhir\">https://acdp.csiro.au/starsapi-sandbox/fhir</a></td></tr></table><p><b>focus</b>: <a href=\"#ServiceRequest_servicerequest-example-cat3-cow\">See above (urn:uuid:47fe6344-e640-4038-82c9-3ebaa8ee594c)</a></p></div>" ] ; # fhir:event [ a fhir:Coding ; fhir:system [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/message-type-code-system"^^xsd:anyURI ] ; fhir:code [ fhir:v "ServiceRequest" ] ] ; # fhir:destination ( [ fhir:endpoint [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir"^^xsd:anyURI ] ; fhir:receiver [ fhir:reference [ fhir:v "Organization/ACDP-TEST99" ] ] ] ) ; # fhir:sender [ fhir:reference [ fhir:v "Organization/ACDP-TEST01" ] ] ; # fhir:source [ fhir:endpoint [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir"^^xsd:anyURI ] ] ; # fhir:focus ( [ fhir:reference [ fhir:v "urn:uuid:47fe6344-e640-4038-82c9-3ebaa8ee594c" ] ] ) . # <urn:uuid:47fe6344-e640-4038-82c9-3ebaa8ee594c> a fhir:ServiceRequest ; fhir:id [ fhir:v "servicerequest-example-cat3-cow"] ; # fhir:meta [ ( fhir:profile [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-servicerequest"^^xsd:anyURI ; fhir:link <https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-servicerequest> ] ) ] ; # fhir:text [ fhir:status [ fhir:v "extensions" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ServiceRequest</b><a name=\"servicerequest-example-cat3-cow\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ServiceRequest "servicerequest-example-cat3-cow" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-servicerequest.html\">CSIRO STARS ServiceRequest Profile</a></p></div><p><b>Submission Category</b>: Exclusion of emergency disease low priority <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-submission-category-code-system.html\">STARS Legacy Submission Category Code System</a>#2)</span></p><p><b>identifier</b>: id: 4af559a1-3c88-41c3-9f95-8036eb448e97</p><p><b>requisition</b>: id: AS20-00183-MM</p><p><b>status</b>: active</p><p><b>intent</b>: proposal</p><p><b>priority</b>: stat</p><p><b>subject</b>: <a href=\"#Patient_cow\">See above (urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c)</a></p><p><b>authoredOn</b>: 2022-01-01</p><p><b>requester</b>: <a href=\"#Organization_DPIRD-servicerequest\">See above (urn:uuid:16326fe4-54f3-4554-bbd8-12a828aee6a4)</a></p><p><b>reasonCode</b>: Please conduct the test suite for FMD and VSV exclusion <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><p><b>specimen</b>: </p><ul><li><a href=\"#Specimen_specimen-example-serum-sample-1\">See above (urn:uuid:44446344-e640-4038-82c9-3ebaa8ee594c)</a></li><li><a href=\"#Specimen_specimen-example-EDTA-blood-sample-2\">See above (urn:uuid:77776344-e640-4038-82c9-3ebaa8ee594c)</a></li><li><a href=\"#Specimen_specimen-example-swab-sample-3\">See above (urn:uuid:88886344-e640-4038-82c9-3ebaa8ee594c)</a></li><li><a href=\"#Specimen_specimen-example-swab-sample-4\">See above (urn:uuid:99996344-e640-4038-82c9-3ebaa8ee594c)</a></li></ul></div>" ] ; # fhir:extension ( [ fhir:url [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-submission-category"^^xsd:anyURI ] ; fhir:value [ a fhir:CodeableConcept ; ( fhir:coding [ fhir:system [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-submission-category-code-system"^^xsd:anyURI ] ; fhir:code [ fhir:v "2" ] ; fhir:display [ fhir:v "Exclusion of emergency disease low priority" ] ] ) ] ] ) ; # fhir:identifier ( [ fhir:value [ fhir:v "4af559a1-3c88-41c3-9f95-8036eb448e97" ] ] ) ; # fhir:requisition [ fhir:value [ fhir:v "AS20-00183-MM" ] ] ; # fhir:status [ fhir:v "active"] ; # fhir:intent [ fhir:v "proposal"] ; # fhir:priority [ fhir:v "stat"] ; # fhir:subject [ fhir:reference [ fhir:v "urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c" ] ] ; # fhir:authoredOn [ fhir:v "2022-01-01"^^xsd:date] ; # fhir:requester [ fhir:reference [ fhir:v "urn:uuid:16326fe4-54f3-4554-bbd8-12a828aee6a4" ] ] ; # fhir:reasonCode ( [ fhir:text [ fhir:v "Please conduct the test suite for FMD and VSV exclusion" ] ] ) ; # fhir:specimen ( [ fhir:reference [ fhir:v "urn:uuid:44446344-e640-4038-82c9-3ebaa8ee594c" ] ] [ fhir:reference [ fhir:v "urn:uuid:77776344-e640-4038-82c9-3ebaa8ee594c" ] ] [ fhir:reference [ fhir:v "urn:uuid:88886344-e640-4038-82c9-3ebaa8ee594c" ] ] [ fhir:reference [ fhir:v "urn:uuid:99996344-e640-4038-82c9-3ebaa8ee594c" ] ] ) . # <urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c> a fhir:Patient ; fhir:id [ fhir:v "cow"] ; # fhir:meta [ ( fhir:profile [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-patient"^^xsd:anyURI ; fhir:link <https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-patient> ] ) ] ; # fhir:text [ fhir:status [ fhir:v "extensions" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Patient</b><a name=\"cow\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Patient "cow" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-patient.html\">CSIRO STARS Patient Profile</a></p></div><p><b>Is Human</b>: false</p><blockquote><p><b>animal</b></p><blockquote><p><b>url</b></p><code>species</code></blockquote><p><b>value</b>: Bovidae <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-species-code-system.html\">STARS Legacy Species Code System</a>#2.9.3)</span></p></blockquote><p><b>name</b>: Cow</p><p><b>managingOrganization</b>: <a href=\"#Organization_organization-owner\">See above (urn:uuid:310d26aa-a23b-4c51-8157-5ec8cb0d8f04)</a></p></div>" ] ; # fhir:extension ( [ fhir:url [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/is-human"^^xsd:anyURI ] ; fhir:value [ fhir:v "false"^^xsd:boolean ] ] [ ( fhir:extension [ fhir:url [ fhir:v "species"^^xsd:anyURI ] ; fhir:value [ a fhir:CodeableConcept ; ( fhir:coding [ fhir:system [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-species-code-system"^^xsd:anyURI ] ; fhir:code [ fhir:v "2.9.3" ] ; fhir:display [ fhir:v "Bovidae" ] ] ) ] ] ) ; fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/patient-animal"^^xsd:anyURI ] ] ) ; # fhir:name ( [ fhir:text [ fhir:v "Cow" ] ] ) ; # fhir:managingOrganization [ fhir:reference [ fhir:v "urn:uuid:310d26aa-a23b-4c51-8157-5ec8cb0d8f04" ] ] . # <urn:uuid:44446344-e640-4038-82c9-3ebaa8ee594c> a fhir:Specimen ; fhir:id [ fhir:v "specimen-example-serum-sample-1"] ; # fhir:meta [ ( fhir:profile [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-specimen"^^xsd:anyURI ; fhir:link <https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-specimen> ] ) ] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"specimen-example-serum-sample-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "specimen-example-serum-sample-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-specimen.html\">CSIRO STARS Specimen Profile</a></p></div><p><b>identifier</b>: Accession ID: Client Sample ID - Cow1 - Sample 1</p><p><b>accessionIdentifier</b>: id: AS-22-3437-0001</p><p><b>type</b>: Blood - Serum <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-sample-type-code-system.html\">STARS Legacy Sample Type Code System</a>#BLOOD_SERUM)</span></p><p><b>subject</b>: <a href=\"#Patient_cow\">See above (urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c)</a></p><p><b>receivedTime</b>: 2022-11-03</p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collected[x]</b></td></tr><tr><td>*</td><td>2022-10-31</td></tr></table><p><b>condition</b>: Cool <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v2-0493.html\">specimenCondition</a>#COOL)</span></p></div>" ] ; # fhir:identifier ( [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "ACSN" ] ] ) ] ; fhir:value [ fhir:v "Client Sample ID - Cow1 - Sample 1" ] ] ) ; # fhir:accessionIdentifier [ fhir:value [ fhir:v "AS-22-3437-0001" ] ] ; # fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-sample-type-code-system"^^xsd:anyURI ] ; fhir:code [ fhir:v "BLOOD_SERUM" ] ; fhir:display [ fhir:v "Blood - Serum" ] ] ) ] ; # fhir:subject [ fhir:reference [ fhir:v "urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c" ] ] ; # fhir:receivedTime [ fhir:v "2022-11-03"^^xsd:date] ; # fhir:collection [ fhir:collected [ fhir:v "2022-10-31"^^xsd:date ] ] ; # fhir:condition ( [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0493"^^xsd:anyURI ] ; fhir:code [ fhir:v "COOL" ] ; fhir:display [ fhir:v "Cool" ] ] ) ] ) . # <urn:uuid:77776344-e640-4038-82c9-3ebaa8ee594c> a fhir:Specimen ; fhir:id [ fhir:v "specimen-example-EDTA-blood-sample-2"] ; # fhir:meta [ ( fhir:profile [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-specimen"^^xsd:anyURI ; fhir:link <https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-specimen> ] ) ] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"specimen-example-EDTA-blood-sample-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "specimen-example-EDTA-blood-sample-2" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-specimen.html\">CSIRO STARS Specimen Profile</a></p></div><p><b>identifier</b>: Accession ID: Client Sample ID - Cow1 - Sample 2</p><p><b>accessionIdentifier</b>: id: AS-22-3437-0002</p><p><b>type</b>: Blood - Serum <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-sample-type-code-system.html\">STARS Legacy Sample Type Code System</a>#BLOOD_SERUM)</span></p><p><b>subject</b>: <a href=\"#Patient_cow\">See above (urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c)</a></p><p><b>receivedTime</b>: 2022-11-03</p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collected[x]</b></td></tr><tr><td>*</td><td>2022-10-31</td></tr></table><h3>Processings</h3><table class=\"grid\"><tr><td>-</td><td><b>Description</b></td></tr><tr><td>*</td><td>Blood preserved in EDTA to prevent clotting</td></tr></table><p><b>condition</b>: Cool <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v2-0493.html\">specimenCondition</a>#COOL)</span></p></div>" ] ; # fhir:identifier ( [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "ACSN" ] ] ) ] ; fhir:value [ fhir:v "Client Sample ID - Cow1 - Sample 2" ] ] ) ; # fhir:accessionIdentifier [ fhir:value [ fhir:v "AS-22-3437-0002" ] ] ; # fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-sample-type-code-system"^^xsd:anyURI ] ; fhir:code [ fhir:v "BLOOD_SERUM" ] ; fhir:display [ fhir:v "Blood - Serum" ] ] ) ] ; # fhir:subject [ fhir:reference [ fhir:v "urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c" ] ] ; # fhir:receivedTime [ fhir:v "2022-11-03"^^xsd:date] ; # fhir:collection [ fhir:collected [ fhir:v "2022-10-31"^^xsd:date ] ] ; # fhir:processing ( [ fhir:description [ fhir:v "Blood preserved in EDTA to prevent clotting" ] ] ) ; # fhir:condition ( [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0493"^^xsd:anyURI ] ; fhir:code [ fhir:v "COOL" ] ; fhir:display [ fhir:v "Cool" ] ] ) ] ) . # <urn:uuid:88886344-e640-4038-82c9-3ebaa8ee594c> a fhir:Specimen ; fhir:id [ fhir:v "specimen-example-swab-sample-3"] ; # fhir:meta [ ( fhir:profile [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-specimen"^^xsd:anyURI ; fhir:link <https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-specimen> ] ) ] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"specimen-example-swab-sample-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "specimen-example-swab-sample-3" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-specimen.html\">CSIRO STARS Specimen Profile</a></p></div><p><b>identifier</b>: Accession ID: Client Sample ID - Cow1 - Sample 3</p><p><b>accessionIdentifier</b>: id: AS-22-3437-0003</p><p><b>type</b>: Swab <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#257261003)</span></p><p><b>subject</b>: <a href=\"#Patient_cow\">See above (urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c)</a></p><p><b>receivedTime</b>: 2022-11-03</p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collected[x]</b></td></tr><tr><td>*</td><td>2022-10-31</td></tr></table><h3>Processings</h3><table class=\"grid\"><tr><td>-</td><td><b>Description</b></td></tr><tr><td>*</td><td>Swab preserved in alcohol solution</td></tr></table><p><b>condition</b>: Cool <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v2-0493.html\">specimenCondition</a>#COOL)</span></p></div>" ] ; # fhir:identifier ( [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "ACSN" ] ] ) ] ; fhir:value [ fhir:v "Client Sample ID - Cow1 - Sample 3" ] ] ) ; # fhir:accessionIdentifier [ fhir:value [ fhir:v "AS-22-3437-0003" ] ] ; # fhir:type [ ( fhir:coding [ a sct:257261003 ; fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ; fhir:code [ fhir:v "257261003" ] ; fhir:display [ fhir:v "Swab" ] ] ) ] ; # fhir:subject [ fhir:reference [ fhir:v "urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c" ] ] ; # fhir:receivedTime [ fhir:v "2022-11-03"^^xsd:date] ; # fhir:collection [ fhir:collected [ fhir:v "2022-10-31"^^xsd:date ] ] ; # fhir:processing ( [ fhir:description [ fhir:v "Swab preserved in alcohol solution" ] ] ) ; # fhir:condition ( [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0493"^^xsd:anyURI ] ; fhir:code [ fhir:v "COOL" ] ; fhir:display [ fhir:v "Cool" ] ] ) ] ) . # <urn:uuid:99996344-e640-4038-82c9-3ebaa8ee594c> a fhir:Specimen ; fhir:id [ fhir:v "specimen-example-swab-sample-4"] ; # fhir:meta [ ( fhir:profile [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-specimen"^^xsd:anyURI ; fhir:link <https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-specimen> ] ) ] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"specimen-example-swab-sample-4\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "specimen-example-swab-sample-4" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-specimen.html\">CSIRO STARS Specimen Profile</a></p></div><p><b>identifier</b>: Accession ID: Client Sample ID - Cow1 - Sample 4</p><p><b>accessionIdentifier</b>: id: AS-22-3437-0004</p><p><b>type</b>: Swab <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#257261003)</span></p><p><b>subject</b>: <a href=\"#Patient_cow\">See above (urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c)</a></p><p><b>receivedTime</b>: 2022-11-03</p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collected[x]</b></td></tr><tr><td>*</td><td>2022-10-31</td></tr></table><h3>Processings</h3><table class=\"grid\"><tr><td>-</td><td><b>Description</b></td></tr><tr><td>*</td><td>Swab preserved in alcohol solution</td></tr></table><p><b>condition</b>: Cool <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v2-0493.html\">specimenCondition</a>#COOL)</span></p></div>" ] ; # fhir:identifier ( [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "ACSN" ] ] ) ] ; fhir:value [ fhir:v "Client Sample ID - Cow1 - Sample 4" ] ] ) ; # fhir:accessionIdentifier [ fhir:value [ fhir:v "AS-22-3437-0004" ] ] ; # fhir:type [ ( fhir:coding [ a sct:257261003 ; fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ; fhir:code [ fhir:v "257261003" ] ; fhir:display [ fhir:v "Swab" ] ] ) ] ; # fhir:subject [ fhir:reference [ fhir:v "urn:uuid:55556344-e640-4038-82c9-3ebaa8ee594c" ] ] ; # fhir:receivedTime [ fhir:v "2022-11-03"^^xsd:date] ; # fhir:collection [ fhir:collected [ fhir:v "2022-10-31"^^xsd:date ] ] ; # fhir:processing ( [ fhir:description [ fhir:v "Swab preserved in alcohol solution" ] ] ) ; # fhir:condition ( [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0493"^^xsd:anyURI ] ; fhir:code [ fhir:v "COOL" ] ; fhir:display [ fhir:v "Cool" ] ] ) ] ) . # <urn:uuid:310d26aa-a23b-4c51-8157-5ec8cb0d8f04> a fhir:Organization ; fhir:id [ fhir:v "organization-owner"] ; # fhir:meta [ ( fhir:profile [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-organization"^^xsd:anyURI ; fhir:link <https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-organization> ] ) ] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Organization</b><a name=\"organization-owner\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Organization "organization-owner" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-organization.html\">CSIRO STARS Organization Profile</a></p></div><p><b>name</b>: bob smith</p></div>" ] ; # fhir:name [ fhir:v "bob smith"] . # <urn:uuid:16326fe4-54f3-4554-bbd8-12a828aee6a4> a fhir:Organization ; fhir:id [ fhir:v "DPIRD-servicerequest"] ; # fhir:meta [ ( fhir:profile [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-organization"^^xsd:anyURI ; fhir:link <https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-organization> ] ) ] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Organization</b><a name=\"DPIRD-servicerequest\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Organization "DPIRD-servicerequest" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-organization.html\">CSIRO STARS Organization Profile</a></p></div><p><b>identifier</b>: id: 710</p><p><b>active</b>: true</p><p><b>name</b>: DPRID - Diagnostics and Laboratory Services (DDLS)</p><p><b>alias</b>: Department of Primary Industries & Regional Development</p><blockquote><p><b>contact</b></p><p><b>telecom</b>: <a href=\"mailto:example@dpird.wa.gov.au\">example@dpird.wa.gov.au</a>, ph: 1300 374 731</p><p><b>address</b>: Department of Primary Industries and Regional Development (DPIRD) 3 Baron-Hay Court Perth WA 6151 Australia </p></blockquote><blockquote><p><b>contact</b></p><p><b>purpose</b>: Billing <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-contactentity-type.html\">Contact entity type</a>#BILL)</span></p><p><b>name</b>: John Smith</p><p><b>telecom</b>: <a href=\"mailto:john.smith@dpird.wa.gov.au\">john.smith@dpird.wa.gov.au</a>, ph: 08 1234 5678, fax: 08 5678 1234</p></blockquote><blockquote><p><b>contact</b></p><p><b>purpose</b>: Report <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-legacy-contactentitytype-code-system.html\">STARS Legacy Contact Entity Type Code System</a>#REPORT)</span></p><p><b>name</b>: Jane Doe</p><p><b>telecom</b>: <a href=\"mailto:jane.doe@dpird.wa.gov.au\">jane.doe@dpird.wa.gov.au</a></p></blockquote></div>" ] ; # fhir:identifier ( [ fhir:value [ fhir:v "710" ] ] ) ; # fhir:active [ fhir:v "true"^^xsd:boolean] ; # fhir:name [ fhir:v "DPRID - Diagnostics and Laboratory Services (DDLS)"] ; # fhir:alias ( [ fhir:v "Department of Primary Industries & Regional Development"] ) ; # fhir:contact ( [ ( fhir:telecom [ fhir:system [ fhir:v "email" ] ; fhir:value [ fhir:v "example@dpird.wa.gov.au" ] ] [ fhir:system [ fhir:v "phone" ] ; fhir:value [ fhir:v "1300 374 731" ] ] ) ; fhir:address [ ( fhir:line [ fhir:v "Department of Primary Industries and Regional Development (DPIRD)" ] [ fhir:v "3 Baron-Hay Court" ] ) ; fhir:city [ fhir:v "Perth" ] ; fhir:state [ fhir:v "WA" ] ; fhir:postalCode [ fhir:v "6151" ] ; fhir:country [ fhir:v "Australia" ] ] ] [ fhir:purpose [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/contactentity-type"^^xsd:anyURI ] ; fhir:code [ fhir:v "BILL" ] ] ) ] ; fhir:name [ fhir:text [ fhir:v "John Smith" ] ] ; ( fhir:telecom [ fhir:system [ fhir:v "email" ] ; fhir:value [ fhir:v "john.smith@dpird.wa.gov.au" ] ] [ fhir:system [ fhir:v "phone" ] ; fhir:value [ fhir:v "08 1234 5678" ] ] [ fhir:system [ fhir:v "fax" ] ; fhir:value [ fhir:v "08 5678 1234" ] ] ) ] [ fhir:purpose [ ( fhir:coding [ fhir:system [ fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-contactentitytype-code-system"^^xsd:anyURI ] ; fhir:code [ fhir:v "REPORT" ] ] ) ] ; fhir:name [ fhir:text [ fhir:v "Jane Doe" ] ] ; ( fhir:telecom [ fhir:system [ fhir:v "email" ] ; fhir:value [ fhir:v "jane.doe@dpird.wa.gov.au" ] ] ) ] ) . #
IG © 2020+ . Package csiro.stars#0.1.0 based on FHIR 4.3.0. Generated 2023-04-26
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