STARS Implementation Guide
0.1.0 - ci-build

STARS Implementation Guide - Local Development build (v0.1.0). See the Directory of published versions

: specimen-example - TTL Representation

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix sct: <http://snomed.info/id/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:Specimen ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "specimen-example"] ; # 
  fhir:meta [
    ( fhir:profile [
fhir:v "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-specimen"^^xsd:anyURI ;
fhir:link <https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-specimen>     ] )
  ] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"specimen-example\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen &quot;specimen-example&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-csiro-stars-specimen.html\">CSIRO STARS Specimen Profile</a></p></div><p><b>identifier</b>: id: Client Sample ID - 12345678</p><p><b>accessionIdentifier</b>: id: AS22-00345</p><p><b>type</b>: Tissue specimen from kidney <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#127474009)</span></p><p><b>subject</b>: <a href=\"Patient-Shorty.html\">Patient/Shorty</a> &quot;&quot;</p><p><b>receivedTime</b>: 2022-03-27</p><h3>Processings</h3><table class=\"grid\"><tr><td>-</td><td><b>Description</b></td></tr><tr><td>*</td><td>fixed in formaldehyde</td></tr></table><p><b>condition</b>: Frozen <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v2-0493.html\">specimenCondition</a>#FROZ)</span></p><p><b>note</b>: sample prepared for transport</p></div>"
  ] ; # 
  fhir:identifier ( [
fhir:value [ fhir:v "Client Sample ID - 12345678" ]
  ] ) ; # 
  fhir:accessionIdentifier [
fhir:value [ fhir:v "AS22-00345" ]
  ] ; # 
  fhir:type [
    ( fhir:coding [
a sct:127474009 ;
fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ;
fhir:code [ fhir:v "127474009" ] ;
fhir:display [ fhir:v "Tissue specimen from kidney" ]     ] )
  ] ; # 
  fhir:subject [
fhir:reference [ fhir:v "Patient/Shorty" ]
  ] ; # 
  fhir:receivedTime [ fhir:v "2022-03-27"^^xsd:date] ; # 
  fhir:processing ( [
fhir:description [ fhir:v "fixed in formaldehyde" ]
  ] ) ; # 
  fhir:condition ( [
    ( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0493"^^xsd:anyURI ] ;
fhir:code [ fhir:v "FROZ" ] ;
fhir:display [ fhir:v "Frozen" ]     ] )
  ] ) ; # 
  fhir:note ( [
fhir:text [ fhir:v "sample prepared for transport" ]
  ] ) . #