STARS Implementation Guide
0.3.0 - ci-build

This page is part of the Csiro Stars (v0.3.0: Releases Draft) based on FHIR (HL7® FHIR® Standard) v5.0.0. No current official version has been published yet. For a full list of available versions, see the Directory of published versions

Artifacts Summary

This page provides a list of the FHIR artifacts defined as part of this implementation guide.

Global profiles

There are no Global profiles defined

Structures: Resource Profiles

These define constraints on FHIR resources for systems conforming to this implementation guide.

CSIRO STARS DiagnosticReport Profile

Results returned through a Diagnostic Report

CSIRO STARS Location Profile

A location being an address, GPS position or Property Identification Code (PIC).

CSIRO STARS MessageHeader Profile

MessageHeader is used in bundles to assist directing to the correct destination

CSIRO STARS Observation Result Profile

Results, Measurements and simple assertions

CSIRO STARS Organization Profile

An organization

CSIRO STARS Patient Profile

A patient, primarily animal

CSIRO STARS Practitioner Profile

A practitioner or other person

CSIRO STARS RelatedPerson Profile

A person that is related to a patient in some way.

CSIRO STARS ServiceRequest Profile

A Service Request, no changes yet

CSIRO STARS Specimen Profile

A specimen / sample

Structures: Extension Definitions

These define constraints on FHIR data types for systems conforming to this implementation guide.

Australian Property Identification Code (PIC)

Property Identification Code (PIC) as provided by the relevant state for tracing and controlling disease through the supply chain.

CSIRO STARS Patient Animal Profile

An animals species, breed and gender status

Is Human

Status of a speciemen is human or not

Patient Age

Age of Patient when specimens were taked

Patient Age Grouping

Grouping of Patient age when specimens were collected.

Requisition

Original identifier from the ServiceRequest requisition.

Specimen Collection Location

Location that the patient originated or was sampled at. eg: the farm address where the animal was located or the gps location where the animal was found and sampled.

Submission Category

The submission category of the tests requested as per DAWE terminology regarding exotic diseases within Australia.

Terminology: Value Sets

These define sets of codes used by systems conforming to this implementation guide.

STARS Analysis Value Set

A list of analysis as compiled from stars and onto.

STARS Contact Entity Type Value Set

the thing to pick from

STARS Control Value Set

the thing to pick from

STARS Diagnosis Value Set

the thing to pick from

STARS Diagnostic Outcomes Value Set

the thing to pick from

STARS Identifier Type Value Set

the thing to pick from

STARS Laboratory Value Set

the thing to pick from

STARS Message Type Value Set

Message Types are used as MessageHeader events

STARS Operator Value Set

legacy and no longer maintained. the thing to pick from

STARS Property Country Value Set

the thing to pick from

STARS Property State Value Set

the thing to pick from

STARS Sample Presentation Value Set

the thing to pick from

STARS Species Group Value Set

the thing to pick from

STARS Species Value Set

the thing to pick from

STARS Submission Category Value Set

the thing to pick from

STARS Submitter Type Value Set

the thing to pick from

STARS Syndrome Value Set

the thing to pick from

Specimen Type Value Set

Codes describing various specimen types from SNOMED-CT.

Terminology: Code Systems

These define new code systems used by systems conforming to this implementation guide.

STARS Contact Entity Type Code System

Codes describing various Contact Entitie Types.

STARS Identifier Type Code System

Codes describing various Identifier Types.

STARS Message Type Code System

Codes describing supported Message Type events.

Example: Example Instances

These are example instances that show what data produced and consumed by systems conforming with this implementation guide might look like.

ACDP

Example organisation ACDP

ACDP-TEST01

Example organisation ACDP-TEST01 for send/receive

ACDP-TEST99

Example organisation ACDP-TEST99 for send/receive

Bat

Bat carcass submitted for rabies exclusion

Client-Example-Organization

Example organisation Client

ExampleVet

Example organisation profile for ExampleVet

MessageHeader-DiagnosticReport

example of DiagnosticReport message header

MessageHeader-ServiceRequest

example of ServiceRequest message header

Shorty

example patient entry

bundle-example-cat3-cow-diagnosticreport

Example send diagnostic report (results) to source laboratory

bundle-example-cat3-cow-servicerequest

Example send service request (specimens) to destination laboratory for testing

bundle-qa-diagnosticreport-complete

QA Bundle for DiagnosticReport Bundle - Complete

bundle-qa-diagnosticreport-minimal

QA Bundle for DiagnosticReport Bundle - Minimal

bundle-qa-documentreference-complete

QA Bundle for DocumentReference Bundle - Complete

bundle-qa-servicerequest-complete

QA Bundle for ServiceRequest Bundle - Complete

bundle-qa-servicerequest-minimal

QA Bundle for ServiceRequest Bundle - Minimal

diagnosticreport-example-cat3-bat

Example Diagnostic Report CAT3 Bat

documentreference-1-qa-diagnosticreport-complete

QA DocumentReference for DiagnosticReport Bundle

documentreference-1-qa-diagnosticreport-minimal

QA DocumentReference for DiagnosticReport Bundle

documentreference-1-qa-documentreference-complete

QA DocumentReference 1 for DocumentReference Bundle

documentreference-2-qa-documentreference-complete

QA DocumentReference 2 for DocumentReference Bundle

example-servicerequest

Example service request

location-example

example-location

observation-example-category3-bat-ABLVIn

Example Observation

observation-example-category3-bat-ABLVPt

Example Observation

observation-example-category3-bat-RABIESFAV

Example Observation

practitioner-example

example-practitioner

relatedperson-example

example-relatedperson

specimen-example

Example specimen

specimen-example-bat

Example bat specimen