STARS Implementation Guide
0.1.0 - ci-build

STARS Implementation Guide - Local Development build (v0.1.0). See the Directory of published versions

: observation-example-category3-bat-ABLVPt - XML Representation

Raw xml | Download



<Observation xmlns="http://hl7.org/fhir">
  <id value="observation-example-category3-bat-ABLVPt"/>
  <meta>
    <profile
             value="https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result"/>
  </meta>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative: Observation</b><a name="observation-example-category3-bat-ABLVPt"> </a></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource Observation &quot;observation-example-category3-bat-ABLVPt&quot; </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-csiro-stars-observation-result.html">CSIRO STARS Observation Result Profile</a></p></div><p><b>identifier</b>: id: ?ngen-9? (use: OFFICIAL)</p><p><b>status</b>: final</p><p><b>code</b>: Australian Bat Lyssavirus - Pteropid RT - TaqMan Assay <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="CodeSystem-legacy-analysis-code-system.html">STARS Legacy Analysis Code System</a>#XR10002)</span></p><p><b>effective</b>: 28 Nov 2022, 11:30:10 am</p><p><b>issued</b>: 29 Nov 2022, 11:30:10 am</p><p><b>value</b>: 36.6 Cycle Threshold<span style="background: LightGoldenRodYellow"> (Details: UCUM code {Ct_value} = '{Ct_value}')</span></p><p><b>interpretation</b>: Positive <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html">ObservationInterpretation</a>#POS)</span></p><blockquote><p><b>component</b></p><p><b>code</b>: Polymerase chain reaction observation <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://browser.ihtsdotools.org/">SNOMED CT</a>#315010001)</span></p><p><b>value</b>: 36.8 Cycle Threshold<span style="background: LightGoldenRodYellow"> (Details: UCUM code {Ct_value} = '{Ct_value}')</span></p><p><b>interpretation</b>: Weak Positive <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html">ObservationInterpretation</a>#NEG)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Polymerase chain reaction observation <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://browser.ihtsdotools.org/">SNOMED CT</a>#315010001)</span></p><p><b>value</b>: 36.4 Cycle Threshold<span style="background: LightGoldenRodYellow"> (Details: UCUM code {Ct_value} = '{Ct_value}')</span></p><p><b>interpretation</b>: Weak Positive <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/5.0.0/CodeSystem-v3-ObservationInterpretation.html">ObservationInterpretation</a>#NEG)</span></p></blockquote></div>
  </text>
  <identifier>
    <use value="official"/>
  </identifier>
  <status value="final"/>
  <code>
    <coding>
      <system
              value="https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-analysis-code-system"/>
      <code value="XR10002"/>
      <display
               value="Australian Bat Lyssavirus - Pteropid RT - TaqMan Assay"/>
    </coding>
  </code>
  <effectiveInstant value="2022-11-28T10:30:10+10:00"/>
  <issued value="2022-11-29T10:30:10+10:00"/>
  <valueQuantity>
    <value value="36.6"/>
    <unit value="Cycle Threshold"/>
    <system value="http://unitsofmeasure.org"/>
    <code value="{Ct_value}"/>
  </valueQuantity>
  <interpretation>
    <coding>
      <system
              value="http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation"/>
      <code value="POS"/>
      <display value="Positive"/>
    </coding>
  </interpretation>
  <component>
    <code>
      <coding>
        <system value="http://snomed.info/sct"/>
        <code value="315010001"/>
        <display value="Polymerase chain reaction observation"/>
      </coding>
    </code>
    <valueQuantity>
      <value value="36.8"/>
      <unit value="Cycle Threshold"/>
      <system value="http://unitsofmeasure.org"/>
      <code value="{Ct_value}"/>
    </valueQuantity>
    <interpretation>
      <coding>
        <system
                value="http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation"/>
        <code value="NEG"/>
        <display value="Weak Positive"/>
      </coding>
    </interpretation>
  </component>
  <component>
    <code>
      <coding>
        <system value="http://snomed.info/sct"/>
        <code value="315010001"/>
        <display value="Polymerase chain reaction observation"/>
      </coding>
    </code>
    <valueQuantity>
      <value value="36.4"/>
      <unit value="Cycle Threshold"/>
      <system value="http://unitsofmeasure.org"/>
      <code value="{Ct_value}"/>
    </valueQuantity>
    <interpretation>
      <coding>
        <system
                value="http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation"/>
        <code value="NEG"/>
        <display value="Weak Positive"/>
      </coding>
    </interpretation>
  </component>
</Observation>