STARS Implementation Guide
0.1.0 - ci-build
STARS Implementation Guide - Local Development build (v0.1.0). See the Directory of published versions
Contents:
This page provides a list of the FHIR artifacts defined as part of this implementation guide.
There are no Global profiles defined
These define constraints on FHIR resources for systems conforming to this implementation guide.
CSIRO STARS DiagnosticReport Profile |
Results returned through a Diagnostic Report |
CSIRO STARS MessageHeader Profile |
MessageHeader is used in bundles to assist directing to the correct destination |
CSIRO STARS Observation Result Profile |
Results, Measurements and simple assertions |
CSIRO STARS Observation SupportingInfo Profile |
Supporting Info Measurements and simple assertions |
CSIRO STARS Organization Profile |
An organization |
CSIRO STARS Patient Profile |
A patient, primarily animal |
CSIRO STARS ServiceRequest Profile |
A Service Request, no changes yet |
CSIRO STARS Specimen Profile |
A specimen / sample |
These define constraints on FHIR data types for systems conforming to this implementation guide.
CSIRO STARS Patient Animal Profile |
An animals species, breed and gender status |
Is Human |
Status of a speciemen is human or not |
Submission Category |
The submission category of the tests requested as per DAWE terminology regarding exotic diseases within Australia. |
These define sets of codes used by systems conforming to this implementation guide.
Specimen Type Value Set |
Codes describing various specimen types from SNOMED-CT. |
STARS Analysis Value Set |
the thing to pick from |
STARS Contact Entity Type Value Set |
the thing to pick from |
STARS Control Value Set |
the thing to pick from |
STARS Diagnosis Value Set |
the thing to pick from |
STARS Diagnostic Outcomes Value Set |
the thing to pick from |
STARS Laboratory Value Set |
the thing to pick from |
STARS Message Type Value Set |
Message Types are used as MessageHeader events |
STARS Operator Value Set |
the thing to pick from |
STARS Property Country Value Set |
the thing to pick from |
STARS Property State Value Set |
the thing to pick from |
STARS Sample Presentation Value Set |
the thing to pick from |
STARS Sample Type Value Set |
the thing to pick from |
STARS Species Group Value Set |
the thing to pick from |
STARS Species Value Set |
the thing to pick from |
STARS Submission Category Value Set |
the thing to pick from |
STARS Submitter Type Value Set |
the thing to pick from |
STARS Syndrome Value Set |
the thing to pick from |
These define new code systems used by systems conforming to this implementation guide.
STARS Legacy Analysis Code System |
Codes describing various Analysis. |
STARS Legacy Contact Entity Type Code System |
Codes describing various Contact Entitie Types. |
STARS Legacy Control Code System |
Codes describing various Control. |
STARS Legacy Diagnosis Code System |
Codes describing various Diagnosis. |
STARS Legacy Diagnostic Outcomes Code System |
Codes describing various Diagnostic Outcomes. |
STARS Legacy Laboratory Code System |
Codes describing various Laboratory. |
STARS Legacy Message Type Code System |
Codes describing various Message Type. |
STARS Legacy Operator Code System |
Codes describing various Operator. |
STARS Legacy Property Country Code System |
Codes describing various Property Country. |
STARS Legacy Property State Code System |
Codes describing various Property State. |
STARS Legacy Sample Presentation Code System |
Codes describing various Sample Presentation. |
STARS Legacy Sample Type Code System |
Codes describing various Sample Type. |
STARS Legacy Species Code System |
Codes describing various Species. |
STARS Legacy Species Group Code System |
Codes describing various Species Group. |
STARS Legacy Submission Category Code System |
Codes describing various Submission Category. |
STARS Legacy Submitter Type Code System |
Codes describing various Submitter Type. |
STARS Legacy Syndrome Code System |
Codes describing various Syndrome. |
STARS Message Type Code System |
Codes describing supported Message Type events. |
These are example instances that show what data produced and consumed by systems conforming with this implementation guide might look like.
10b430b6-1039-4af7-be30-83cdbdb055c6 |
Example of Patient - Deceased Grey-headed Flying Fox |
1c01bb5c-55af-45e4-a088-a9f7e8cc9815 |
Specimen to be tested |
85d72429-82e2-4199-b9e3-2124d43455c1 |
Example ServiceRequest for sending 1x samples to be tested for Lyssavirus exclusion within a bundle (cat 2) |
8f56a3a6-0229-4fa2-9016-75d744eb0c2f |
example message header as first entry in bundle |
ACDP |
Example organisation ACDP |
ACDP-TEST01 |
Example organisation ACDP-TEST01 for send/receive |
ACDP-TEST99 |
Example organisation ACDP-TEST99 for send/receive |
Bat |
Bat carcass submitted for rabies exclusion |
bundle-example-cat3-cow |
Example send diagnostic report (results) to source laboratory |
bundle-example-cat3-cow-servicerequest |
Example send service request (specimens) to destination laboratory for testing |
bundle-qa-diagnosticreport |
QA Bundle for DiagnosticReport Bundle |
bundle-qa-servicerequest |
QA Bundle for ServiceRequest Bundle |
Client-Example-Organization |
Example organisation Client |
cow |
Bovine samples submitted for FMD exclusion |
diagnosticreport-example-cat3-bat |
Example Diagnostic Report CAT3 Bat |
diagnosticreport-example-cat3-cow |
Example Diagnostic Report CAT3 Cow |
documentreference-1-qa-diagnosticreport |
QA DocumentReference for DiagnosticReport Bundle |
DPIRD |
Example organisation profile fro DPRID |
DPIRD-servicerequest |
Example organisation profile from DPRID for reporting and billing contacts |
example-send-service-request |
Example sending ServiceRrequest to destination laboratory to request testing of specimen |
example-servicerequest |
Example service request |
MessageHeader-DiagnosticReport |
example of DiagnosticReport message header |
MessageHeader-ServiceRequest |
example of ServiceRequest message header |
observation-example-category3-bat-ABLVIn |
Example Observation |
observation-example-category3-bat-ABLVPt |
Example Observation |
observation-example-category3-bat-RABIESFAV |
Example Observation |
observation-example-category3-sample-1-FMDCE0 |
Example Observation of FMD_CE_0 analysis (1) |
observation-example-category3-sample-1-FMDCEA |
Example Observation of FMD_CE_A analysis (1) |
observation-example-category3-sample-1-FMDCEAS1 |
Example Observation of FMD_CE_AS1 analysis (1) |
observation-example-category3-sample-1-FMDVMPTQM |
Example Observation of FMD_MP_TQM analysis (1) |
observation-example-category3-sample-1-VSVSNTIN |
Example Observation of VSV_SNT_IN analysis (1) |
observation-example-category3-sample-1-VSVSNTNJ |
Example Observation of VSV_SNT_NJ analysis (1) |
observation-example-category3-sample-1-VSVTQMMP |
Example Observation of VSV_TQM_MP analysis (1) |
observation-example-category3-sample-2-FMDVMPTQM |
Example Observation of FMD_MP_TQM analysis (2) |
observation-example-category3-sample-2-VSVTQMMP |
Example Observation of VSV_TQM_MP analysis (2) |
observation-example-category3-sample-3-FMDVISO |
Example Observation of FMD_ISO analysis (1) |
observation-example-category3-sample-3-FMDVMPTQM |
Example Observation of FMD_MP_TQM analysis (3) |
observation-example-category3-sample-3-VSVISO |
Example Observation of VSV_ISO analysis (1) |
observation-example-category3-sample-3-VSVTQMMP |
Example Observation of VSV_TQM_MP analysis (3) |
observation-example-category3-sample-4-FMDVISO |
Example Observation of FMD_ISO analysis (2) |
observation-example-category3-sample-4-FMDVMPTQM |
Example Observation of FMD_MP_TQM analysis (4) |
observation-example-category3-sample-4-VSVISO |
Example Observation of VSV_ISO analysis (2) |
observation-example-category3-sample-4-VSVTQMMP |
Example Observation of VSV_TQM_MP analysis (4) |
organization-owner |
Owner |
practitioner-example |
example-practitioner |
servicerequest-example-cat3-cow |
Example ServiceRequest for sending 4x bovine samples to be tested for FMD and VSV disease exclusion (cat 2) |
Shorty |
example patient entry |
specimen-example |
Example specimen |
specimen-example-bat |
Example bat specimen |
specimen-example-EDTA-blood-sample-2 |
Example cow specimen |
specimen-example-serum-sample-1 |
Serum sample taken from cow |
specimen-example-swab-sample-3 |
Example swab specimen |
specimen-example-swab-sample-4 |
Example swab specimen |