STARS Implementation Guide
0.1.0 - ci-build
STARS Implementation Guide - Local Development build (v0.1.0). See the Directory of published versions
| Draft as of 2023-04-26 |
{
"resourceType" : "CodeSystem",
"id" : "legacy-sample-presentation-code-system",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-sample-presentation-code-system</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">BACTERIAL_TRANSPORT_MEDIUM<a name=\"legacy-sample-presentation-code-system-BACTERIAL_TRANSPORT_MEDIUM\"> </a></td><td>Bacterial Transport Medium</td></tr><tr><td style=\"white-space:nowrap\">BROTH<a name=\"legacy-sample-presentation-code-system-BROTH\"> </a></td><td>Broth</td></tr><tr><td style=\"white-space:nowrap\">CELL_CULTURE<a name=\"legacy-sample-presentation-code-system-CELL_CULTURE\"> </a></td><td>Cell Culture</td></tr><tr><td style=\"white-space:nowrap\">CITRATE<a name=\"legacy-sample-presentation-code-system-CITRATE\"> </a></td><td>Citrate</td></tr><tr><td style=\"white-space:nowrap\">CLIPPINGS<a name=\"legacy-sample-presentation-code-system-CLIPPINGS\"> </a></td><td>Clippings</td></tr><tr><td style=\"white-space:nowrap\">CLOTTED<a name=\"legacy-sample-presentation-code-system-CLOTTED\"> </a></td><td>Clotted</td></tr><tr><td style=\"white-space:nowrap\">CULTURE<a name=\"legacy-sample-presentation-code-system-CULTURE\"> </a></td><td>Culture</td></tr><tr><td style=\"white-space:nowrap\">CUTTING<a name=\"legacy-sample-presentation-code-system-CUTTING\"> </a></td><td>Cutting</td></tr><tr><td style=\"white-space:nowrap\">DEAD<a name=\"legacy-sample-presentation-code-system-DEAD\"> </a></td><td>Dead</td></tr><tr><td style=\"white-space:nowrap\">DESSICATED<a name=\"legacy-sample-presentation-code-system-DESSICATED\"> </a></td><td>Dessicated</td></tr><tr><td style=\"white-space:nowrap\">DRIED<a name=\"legacy-sample-presentation-code-system-DRIED\"> </a></td><td>Dried</td></tr><tr><td style=\"white-space:nowrap\">EDTA<a name=\"legacy-sample-presentation-code-system-EDTA\"> </a></td><td>EDTA</td></tr><tr><td style=\"white-space:nowrap\">EDTA_AND_SMEAR<a name=\"legacy-sample-presentation-code-system-EDTA_AND_SMEAR\"> </a></td><td>EDTA and Smear</td></tr><tr><td style=\"white-space:nowrap\">FIXED<a name=\"legacy-sample-presentation-code-system-FIXED\"> </a></td><td>Fixed</td></tr><tr><td style=\"white-space:nowrap\">FLUORIDE_OXALATE<a name=\"legacy-sample-presentation-code-system-FLUORIDE_OXALATE\"> </a></td><td>Fluoride-Oxalate</td></tr><tr><td style=\"white-space:nowrap\">FREEZE_DRIED<a name=\"legacy-sample-presentation-code-system-FREEZE_DRIED\"> </a></td><td>Freeze dried</td></tr><tr><td style=\"white-space:nowrap\">FRESH<a name=\"legacy-sample-presentation-code-system-FRESH\"> </a></td><td>Fresh</td></tr><tr><td style=\"white-space:nowrap\">FROZEN<a name=\"legacy-sample-presentation-code-system-FROZEN\"> </a></td><td>Frozen</td></tr><tr><td style=\"white-space:nowrap\">HEPARIN<a name=\"legacy-sample-presentation-code-system-HEPARIN\"> </a></td><td>Heparin</td></tr><tr><td style=\"white-space:nowrap\">ISOLATE<a name=\"legacy-sample-presentation-code-system-ISOLATE\"> </a></td><td>Isolate</td></tr><tr><td style=\"white-space:nowrap\">LIVE<a name=\"legacy-sample-presentation-code-system-LIVE\"> </a></td><td>Live</td></tr><tr><td style=\"white-space:nowrap\">MATCHSTICK<a name=\"legacy-sample-presentation-code-system-MATCHSTICK\"> </a></td><td>Matchstick</td></tr><tr><td style=\"white-space:nowrap\">MYCOPLASMA_TRANSPORT_MEDIA<a name=\"legacy-sample-presentation-code-system-MYCOPLASMA_TRANSPORT_MEDIA\"> </a></td><td>Mycoplasma Transport Media</td></tr><tr><td style=\"white-space:nowrap\">NUCLEIC_ACID_EXTRACT<a name=\"legacy-sample-presentation-code-system-NUCLEIC_ACID_EXTRACT\"> </a></td><td>Nucleic Acid Extract</td></tr><tr><td style=\"white-space:nowrap\">PARAFFIN_BLOCK<a name=\"legacy-sample-presentation-code-system-PARAFFIN_BLOCK\"> </a></td><td>Paraffin Block</td></tr><tr><td style=\"white-space:nowrap\">PEPTONE<a name=\"legacy-sample-presentation-code-system-PEPTONE\"> </a></td><td>Peptone</td></tr><tr><td style=\"white-space:nowrap\">POOLED<a name=\"legacy-sample-presentation-code-system-POOLED\"> </a></td><td>Pooled</td></tr><tr><td style=\"white-space:nowrap\">RAW<a name=\"legacy-sample-presentation-code-system-RAW\"> </a></td><td>Raw</td></tr><tr><td style=\"white-space:nowrap\">SCRAPING<a name=\"legacy-sample-presentation-code-system-SCRAPING\"> </a></td><td>Scraping</td></tr><tr><td style=\"white-space:nowrap\">SMEAR<a name=\"legacy-sample-presentation-code-system-SMEAR\"> </a></td><td>Smear</td></tr><tr><td style=\"white-space:nowrap\">SUPERNATANT<a name=\"legacy-sample-presentation-code-system-SUPERNATANT\"> </a></td><td>Supernatant</td></tr><tr><td style=\"white-space:nowrap\">SUSPENSION<a name=\"legacy-sample-presentation-code-system-SUSPENSION\"> </a></td><td>Suspension</td></tr><tr><td style=\"white-space:nowrap\">SWAB<a name=\"legacy-sample-presentation-code-system-SWAB\"> </a></td><td>Swab</td></tr><tr><td style=\"white-space:nowrap\">UNPRESERVED<a name=\"legacy-sample-presentation-code-system-UNPRESERVED\"> </a></td><td>Unpreserved</td></tr><tr><td style=\"white-space:nowrap\">UNSPECIFIED<a name=\"legacy-sample-presentation-code-system-UNSPECIFIED\"> </a></td><td>Unspecified Value.</td></tr><tr><td style=\"white-space:nowrap\">VIRUS_TRANSPORT_MEDIUM<a name=\"legacy-sample-presentation-code-system-VIRUS_TRANSPORT_MEDIUM\"> </a></td><td>Virus Transport Medium</td></tr><tr><td style=\"white-space:nowrap\">WASHING<a name=\"legacy-sample-presentation-code-system-WASHING\"> </a></td><td>Washing</td></tr><tr><td style=\"white-space:nowrap\">WET_PREPARATION<a name=\"legacy-sample-presentation-code-system-WET_PREPARATION\"> </a></td><td>Wet Preparation</td></tr></table></div>"
},
"url" : "https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-sample-presentation-code-system",
"version" : "0.1.0",
"name" : "LegacySamplePresentationCodeSystem",
"title" : "STARS Legacy Sample Presentation Code System",
"status" : "draft",
"experimental" : false,
"date" : "2023-04-26T15:23:36+10:00",
"contact" : [
{
"name" : "Conor Vahland",
"telecom" : [
{
"system" : "email",
"value" : "mailto:stars@csiro.au"
}
]
}
],
"description" : "Codes describing various Sample Presentation.",
"caseSensitive" : false,
"content" : "complete",
"count" : 38,
"concept" : [
{
"code" : "BACTERIAL_TRANSPORT_MEDIUM",
"display" : "Bacterial Transport Medium"
},
{
"code" : "BROTH",
"display" : "Broth"
},
{
"code" : "CELL_CULTURE",
"display" : "Cell Culture"
},
{
"code" : "CITRATE",
"display" : "Citrate"
},
{
"code" : "CLIPPINGS",
"display" : "Clippings"
},
{
"code" : "CLOTTED",
"display" : "Clotted"
},
{
"code" : "CULTURE",
"display" : "Culture"
},
{
"code" : "CUTTING",
"display" : "Cutting"
},
{
"code" : "DEAD",
"display" : "Dead"
},
{
"code" : "DESSICATED",
"display" : "Dessicated"
},
{
"code" : "DRIED",
"display" : "Dried"
},
{
"code" : "EDTA",
"display" : "EDTA"
},
{
"code" : "EDTA_AND_SMEAR",
"display" : "EDTA and Smear"
},
{
"code" : "FIXED",
"display" : "Fixed"
},
{
"code" : "FLUORIDE_OXALATE",
"display" : "Fluoride-Oxalate"
},
{
"code" : "FREEZE_DRIED",
"display" : "Freeze dried"
},
{
"code" : "FRESH",
"display" : "Fresh"
},
{
"code" : "FROZEN",
"display" : "Frozen"
},
{
"code" : "HEPARIN",
"display" : "Heparin"
},
{
"code" : "ISOLATE",
"display" : "Isolate"
},
{
"code" : "LIVE",
"display" : "Live"
},
{
"code" : "MATCHSTICK",
"display" : "Matchstick"
},
{
"code" : "MYCOPLASMA_TRANSPORT_MEDIA",
"display" : "Mycoplasma Transport Media"
},
{
"code" : "NUCLEIC_ACID_EXTRACT",
"display" : "Nucleic Acid Extract"
},
{
"code" : "PARAFFIN_BLOCK",
"display" : "Paraffin Block"
},
{
"code" : "PEPTONE",
"display" : "Peptone"
},
{
"code" : "POOLED",
"display" : "Pooled"
},
{
"code" : "RAW",
"display" : "Raw"
},
{
"code" : "SCRAPING",
"display" : "Scraping"
},
{
"code" : "SMEAR",
"display" : "Smear"
},
{
"code" : "SUPERNATANT",
"display" : "Supernatant"
},
{
"code" : "SUSPENSION",
"display" : "Suspension"
},
{
"code" : "SWAB",
"display" : "Swab"
},
{
"code" : "UNPRESERVED",
"display" : "Unpreserved"
},
{
"code" : "UNSPECIFIED",
"display" : "Unspecified Value."
},
{
"code" : "VIRUS_TRANSPORT_MEDIUM",
"display" : "Virus Transport Medium"
},
{
"code" : "WASHING",
"display" : "Washing"
},
{
"code" : "WET_PREPARATION",
"display" : "Wet Preparation"
}
]
}
IG © 2020+ . Package csiro.stars#0.1.0 based on FHIR 4.3.0. Generated 2023-04-26
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