CSIRO.STARS\STARS Legacy Sample Presentation Code System - XML Representation

STARS Implementation Guide
0.1.0 - ci-build
STARS Implementation Guide - Local Development build (v0.1.0). See the Directory of published versions
: STARS Legacy Sample Presentation Code System - XML Representation

Draft as of 2023-04-26


<CodeSystem xmlns="http://hl7.org/fhir">
  <id value="legacy-sample-presentation-code-system"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p>This code system <code>https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-sample-presentation-code-system</code> defines the following codes:</p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style="white-space:nowrap">BACTERIAL_TRANSPORT_MEDIUM<a name="legacy-sample-presentation-code-system-BACTERIAL_TRANSPORT_MEDIUM"> </a></td><td>Bacterial Transport Medium</td></tr><tr><td style="white-space:nowrap">BROTH<a name="legacy-sample-presentation-code-system-BROTH"> </a></td><td>Broth</td></tr><tr><td style="white-space:nowrap">CELL_CULTURE<a name="legacy-sample-presentation-code-system-CELL_CULTURE"> </a></td><td>Cell Culture</td></tr><tr><td style="white-space:nowrap">CITRATE<a name="legacy-sample-presentation-code-system-CITRATE"> </a></td><td>Citrate</td></tr><tr><td style="white-space:nowrap">CLIPPINGS<a name="legacy-sample-presentation-code-system-CLIPPINGS"> </a></td><td>Clippings</td></tr><tr><td style="white-space:nowrap">CLOTTED<a name="legacy-sample-presentation-code-system-CLOTTED"> </a></td><td>Clotted</td></tr><tr><td style="white-space:nowrap">CULTURE<a name="legacy-sample-presentation-code-system-CULTURE"> </a></td><td>Culture</td></tr><tr><td style="white-space:nowrap">CUTTING<a name="legacy-sample-presentation-code-system-CUTTING"> </a></td><td>Cutting</td></tr><tr><td style="white-space:nowrap">DEAD<a name="legacy-sample-presentation-code-system-DEAD"> </a></td><td>Dead</td></tr><tr><td style="white-space:nowrap">DESSICATED<a name="legacy-sample-presentation-code-system-DESSICATED"> </a></td><td>Dessicated</td></tr><tr><td style="white-space:nowrap">DRIED<a name="legacy-sample-presentation-code-system-DRIED"> </a></td><td>Dried</td></tr><tr><td style="white-space:nowrap">EDTA<a name="legacy-sample-presentation-code-system-EDTA"> </a></td><td>EDTA</td></tr><tr><td style="white-space:nowrap">EDTA_AND_SMEAR<a name="legacy-sample-presentation-code-system-EDTA_AND_SMEAR"> </a></td><td>EDTA and Smear</td></tr><tr><td style="white-space:nowrap">FIXED<a name="legacy-sample-presentation-code-system-FIXED"> </a></td><td>Fixed</td></tr><tr><td style="white-space:nowrap">FLUORIDE_OXALATE<a name="legacy-sample-presentation-code-system-FLUORIDE_OXALATE"> </a></td><td>Fluoride-Oxalate</td></tr><tr><td style="white-space:nowrap">FREEZE_DRIED<a name="legacy-sample-presentation-code-system-FREEZE_DRIED"> </a></td><td>Freeze dried</td></tr><tr><td style="white-space:nowrap">FRESH<a name="legacy-sample-presentation-code-system-FRESH"> </a></td><td>Fresh</td></tr><tr><td style="white-space:nowrap">FROZEN<a name="legacy-sample-presentation-code-system-FROZEN"> </a></td><td>Frozen</td></tr><tr><td style="white-space:nowrap">HEPARIN<a name="legacy-sample-presentation-code-system-HEPARIN"> </a></td><td>Heparin</td></tr><tr><td style="white-space:nowrap">ISOLATE<a name="legacy-sample-presentation-code-system-ISOLATE"> </a></td><td>Isolate</td></tr><tr><td style="white-space:nowrap">LIVE<a name="legacy-sample-presentation-code-system-LIVE"> </a></td><td>Live</td></tr><tr><td style="white-space:nowrap">MATCHSTICK<a name="legacy-sample-presentation-code-system-MATCHSTICK"> </a></td><td>Matchstick</td></tr><tr><td style="white-space:nowrap">MYCOPLASMA_TRANSPORT_MEDIA<a name="legacy-sample-presentation-code-system-MYCOPLASMA_TRANSPORT_MEDIA"> </a></td><td>Mycoplasma Transport Media</td></tr><tr><td style="white-space:nowrap">NUCLEIC_ACID_EXTRACT<a name="legacy-sample-presentation-code-system-NUCLEIC_ACID_EXTRACT"> </a></td><td>Nucleic Acid Extract</td></tr><tr><td style="white-space:nowrap">PARAFFIN_BLOCK<a name="legacy-sample-presentation-code-system-PARAFFIN_BLOCK"> </a></td><td>Paraffin Block</td></tr><tr><td style="white-space:nowrap">PEPTONE<a name="legacy-sample-presentation-code-system-PEPTONE"> </a></td><td>Peptone</td></tr><tr><td style="white-space:nowrap">POOLED<a name="legacy-sample-presentation-code-system-POOLED"> </a></td><td>Pooled</td></tr><tr><td style="white-space:nowrap">RAW<a name="legacy-sample-presentation-code-system-RAW"> </a></td><td>Raw</td></tr><tr><td style="white-space:nowrap">SCRAPING<a name="legacy-sample-presentation-code-system-SCRAPING"> </a></td><td>Scraping</td></tr><tr><td style="white-space:nowrap">SMEAR<a name="legacy-sample-presentation-code-system-SMEAR"> </a></td><td>Smear</td></tr><tr><td style="white-space:nowrap">SUPERNATANT<a name="legacy-sample-presentation-code-system-SUPERNATANT"> </a></td><td>Supernatant</td></tr><tr><td style="white-space:nowrap">SUSPENSION<a name="legacy-sample-presentation-code-system-SUSPENSION"> </a></td><td>Suspension</td></tr><tr><td style="white-space:nowrap">SWAB<a name="legacy-sample-presentation-code-system-SWAB"> </a></td><td>Swab</td></tr><tr><td style="white-space:nowrap">UNPRESERVED<a name="legacy-sample-presentation-code-system-UNPRESERVED"> </a></td><td>Unpreserved</td></tr><tr><td style="white-space:nowrap">UNSPECIFIED<a name="legacy-sample-presentation-code-system-UNSPECIFIED"> </a></td><td>Unspecified Value.</td></tr><tr><td style="white-space:nowrap">VIRUS_TRANSPORT_MEDIUM<a name="legacy-sample-presentation-code-system-VIRUS_TRANSPORT_MEDIUM"> </a></td><td>Virus Transport Medium</td></tr><tr><td style="white-space:nowrap">WASHING<a name="legacy-sample-presentation-code-system-WASHING"> </a></td><td>Washing</td></tr><tr><td style="white-space:nowrap">WET_PREPARATION<a name="legacy-sample-presentation-code-system-WET_PREPARATION"> </a></td><td>Wet Preparation</td></tr></table></div>
  </text>
  <url
       value="https://acdp.csiro.au/starsapi-sandbox/fhir-ig/stars/CodeSystem/legacy-sample-presentation-code-system"/>
  <version value="0.1.0"/>
  <name value="LegacySamplePresentationCodeSystem"/>
  <title value="STARS Legacy Sample Presentation Code System"/>
  <status value="draft"/>
  <experimental value="false"/>
  <date value="2023-04-26T15:23:36+10:00"/>
  <contact>
    <name value="Conor Vahland"/>
    <telecom>
      <system value="email"/>
      <value value="mailto:stars@csiro.au"/>
    </telecom>
  </contact>
  <description value="Codes describing various Sample Presentation."/>
  <caseSensitive value="false"/>
  <content value="complete"/>
  <count value="38"/>
  <concept>
    <code value="BACTERIAL_TRANSPORT_MEDIUM"/>
    <display value="Bacterial Transport Medium"/>
  </concept>
  <concept>
    <code value="BROTH"/>
    <display value="Broth"/>
  </concept>
  <concept>
    <code value="CELL_CULTURE"/>
    <display value="Cell Culture"/>
  </concept>
  <concept>
    <code value="CITRATE"/>
    <display value="Citrate"/>
  </concept>
  <concept>
    <code value="CLIPPINGS"/>
    <display value="Clippings"/>
  </concept>
  <concept>
    <code value="CLOTTED"/>
    <display value="Clotted"/>
  </concept>
  <concept>
    <code value="CULTURE"/>
    <display value="Culture"/>
  </concept>
  <concept>
    <code value="CUTTING"/>
    <display value="Cutting"/>
  </concept>
  <concept>
    <code value="DEAD"/>
    <display value="Dead"/>
  </concept>
  <concept>
    <code value="DESSICATED"/>
    <display value="Dessicated"/>
  </concept>
  <concept>
    <code value="DRIED"/>
    <display value="Dried"/>
  </concept>
  <concept>
    <code value="EDTA"/>
    <display value="EDTA"/>
  </concept>
  <concept>
    <code value="EDTA_AND_SMEAR"/>
    <display value="EDTA and Smear"/>
  </concept>
  <concept>
    <code value="FIXED"/>
    <display value="Fixed"/>
  </concept>
  <concept>
    <code value="FLUORIDE_OXALATE"/>
    <display value="Fluoride-Oxalate"/>
  </concept>
  <concept>
    <code value="FREEZE_DRIED"/>
    <display value="Freeze dried"/>
  </concept>
  <concept>
    <code value="FRESH"/>
    <display value="Fresh"/>
  </concept>
  <concept>
    <code value="FROZEN"/>
    <display value="Frozen"/>
  </concept>
  <concept>
    <code value="HEPARIN"/>
    <display value="Heparin"/>
  </concept>
  <concept>
    <code value="ISOLATE"/>
    <display value="Isolate"/>
  </concept>
  <concept>
    <code value="LIVE"/>
    <display value="Live"/>
  </concept>
  <concept>
    <code value="MATCHSTICK"/>
    <display value="Matchstick"/>
  </concept>
  <concept>
    <code value="MYCOPLASMA_TRANSPORT_MEDIA"/>
    <display value="Mycoplasma Transport Media"/>
  </concept>
  <concept>
    <code value="NUCLEIC_ACID_EXTRACT"/>
    <display value="Nucleic Acid Extract"/>
  </concept>
  <concept>
    <code value="PARAFFIN_BLOCK"/>
    <display value="Paraffin Block"/>
  </concept>
  <concept>
    <code value="PEPTONE"/>
    <display value="Peptone"/>
  </concept>
  <concept>
    <code value="POOLED"/>
    <display value="Pooled"/>
  </concept>
  <concept>
    <code value="RAW"/>
    <display value="Raw"/>
  </concept>
  <concept>
    <code value="SCRAPING"/>
    <display value="Scraping"/>
  </concept>
  <concept>
    <code value="SMEAR"/>
    <display value="Smear"/>
  </concept>
  <concept>
    <code value="SUPERNATANT"/>
    <display value="Supernatant"/>
  </concept>
  <concept>
    <code value="SUSPENSION"/>
    <display value="Suspension"/>
  </concept>
  <concept>
    <code value="SWAB"/>
    <display value="Swab"/>
  </concept>
  <concept>
    <code value="UNPRESERVED"/>
    <display value="Unpreserved"/>
  </concept>
  <concept>
    <code value="UNSPECIFIED"/>
    <display value="Unspecified Value."/>
  </concept>
  <concept>
    <code value="VIRUS_TRANSPORT_MEDIUM"/>
    <display value="Virus Transport Medium"/>
  </concept>
  <concept>
    <code value="WASHING"/>
    <display value="Washing"/>
  </concept>
  <concept>
    <code value="WET_PREPARATION"/>
    <display value="Wet Preparation"/>
  </concept>
</CodeSystem>